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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu015663.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YA | ||||||||
Protein Properties | Length: 208aa MW: 23013.7 Da PI: 6.8612 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 48.5 | 3e-15 | 167 | 202 | 1 | 37 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 +ep+YVNaKQy++Il+RR+ Rak+e e+k +ksrk+ Oeu015663.1 167 QEPVYVNAKQYHGILRRRHLRAKAELESKA-IKSRKE 202 69***************************9.999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 208 aa Download sequence |
MHSNSKNSNL RESSFYEVSN STLLSEPWWK KTGYSSFPTV MMQGNASDST SLEQAMDGQS 60 HSEDGTNDGD AAAAKQSRCN IPPHPDRNYG VEDPNLPHGS LTIRPRSFDN LVQPPHQEFV 120 GHSIACASNP RDPYHGGMMA AYGQPLVPPD LLDVHQARIP LPLEMAQEPV YVNAKQYHGI 180 LRRRHLRAKA ELESKAIKSR KELELVS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 2e-41 | NF-YA family protein |