PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015662.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 288aa    MW: 32151.7 Da    PI: 8.9874
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015662.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.62.7e-30167223158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep+YVNaKQy++Il+RR+ Rak+e e+k  +ksrkpylheSRh+hAlrR+R+sgGrF
  Oeu015662.1 167 QEPVYVNAKQYHGILRRRHLRAKAELERKA-IKSRKPYLHESRHQHALRRARSSGGRF 223
                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MHSNSKNSNL RESSFYEISN STLLSEPWWK KTGYSSFPTV MMQGNASDST SLEQAMDGQS  60
HSEDGTNDGD AAAAKQSRCN IPPHPDRNYG VEDPNLPHGS LTIRPRSFDN LVQPPHQEFV  120
GHSIACASNP RDPYHGGMMA AYGQPLVPPD LLDVHQARIP LPLEMAQEPV YVNAKQYHGI  180
LRRRHLRAKA ELERKAIKSR KPYLHESRHQ HALRRARSSG GRFAKKSDAD LLNRTVSGSA  240
ISSRFEPLPS EFNGSEVHEV QHIHGNDLSN FRKRTNPQEP AYDSRFG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.29e-61NF-YA family protein