PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014966.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 484aa MW: 52934.3 Da PI: 9.2991

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014966.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3e-06	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F+r nL+ H r H Oeu014966.1 59 FICEICTKGFKRDQNLQLHRRGH 81 89*******************88 PP
2	zf-C2H2	12.8	0.00036	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Oeu014966.1 136 WKCEKCSKKYAVQSDWKAHSKTC 158 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MSGDEFSIAH VFPQEPETNP NPKSNANPTA KKKRLPGNPD PDAQVIALSP TTLMTTNRFI 60 CEICTKGFKR DQNLQLHRRG HNLPWKLKQR ANKDQIIKKV YICPEKTCVH HDPSRALGDL 120 TGIKKHFSRK HGEKKWKCEK CSKKYAVQSD WKAHSKTCGT REYKCDCGTL FSRKDSFITH 180 RAFCDALAEE SARSVITVSA TNLNFKNDNL NGTLMNPNFP HGFNVSTGIS QVGAVFKSDY 240 NDVISRSSLV GDQQKPRLSL WLDQPNPHQL NFIDMNCNSN LFIPSSSTGL QEMPQSSSSM 300 GNYTLPHRQG LVEEEVIGKG STVDHSLASL FSDNQKHQSN SSASMSATAL LQKAARMGST 360 KSNPAFFGNA FGMMNSSSSS SSSSPNANSL SQNRSALHQI FGKQHENLSG EARDSIMGGS 420 NLMQTSATQS QAILVNLHGA EHSLTRDFLG VGGEGSNPFL SQQLAEFASM SSAMGLSQFT 480 SNH*

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MSGDEFSIAH VFPQEPETNP NPKSNANPTA KKKRLPGNPD PDAQVIALSP TTLMTTNRFI  60
CEICTKGFKR DQNLQLHRRG HNLPWKLKQR ANKDQIIKKV YICPEKTCVH HDPSRALGDL  120
TGIKKHFSRK HGEKKWKCEK CSKKYAVQSD WKAHSKTCGT REYKCDCGTL FSRKDSFITH  180
RAFCDALAEE SARSVITVSA TNLNFKNDNL NGTLMNPNFP HGFNVSTGIS QVGAVFKSDY  240
NDVISRSSLV GDQQKPRLSL WLDQPNPHQL NFIDMNCNSN LFIPSSSTGL QEMPQSSSSM  300
GNYTLPHRQG LVEEEVIGKG STVDHSLASL FSDNQKHQSN SSASMSATAL LQKAARMGST  360
KSNPAFFGNA FGMMNSSSSS SSSSPNANSL SQNRSALHQI FGKQHENLSG EARDSIMGGS  420
NLMQTSATQS QAILVNLHGA EHSLTRDFLG VGGEGSNPFL SQQLAEFASM SSAMGLSQFT  480
SNH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-103	C2H2 family protein