PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014940.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRAS

Protein Properties

Length: 502aa MW: 56530.8 Da PI: 9.2544

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014940.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	23.2	7.4e-08	236	288	2	54
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarla 54 +lLl++Ae v ++l +a++lL + + +as++ +p++R ++yf+eAL +r++ Oeu014940.1 236 AQLLLAAAEKVGYKQLDQARRLLGNCQWIASSASTPIRRSIHYFAEALLERIN 288 589***********************************************996 PP
2	GRAS	124.6	1.2e-38	338	489	224	374
GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321 ++++ ++++++P ++ v+e ea+hns+sF++rf+e+l yy+al+ds+++++++++++r+ +E ++ + i ++va+eg er+ r+ + Wr+ + + Oeu014940.1 338 LKNLMTVMRRINPSIMLVSEVEAKHNSPSFVNRFIESLFYYTALLDSIAEGMAQDNKNRMEIESVIYCEGIHSIVAAEGCERVTRNVPISVWRAFFAR 435 4569999***************************************************************************************** PP GRAS 322 aGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 +G+ +++ls+ a qa l++ ++ ++ +++ +s++l+ gWk+ pL+s+SaW+ Oeu014940.1 436 FGLVELELSTASAYQACLIVDLFNcGKSCTLDANSKCLFVGWKGTPLFSLSAWK 489 ********************9999***********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MVHNAYNYEK ESVMDRAYKR NIVWIPNVIP STRLYYTIIQ RLEGGIVSSQ TRRTAATFSI 60 LKGFHVNNGR SLLQFLKQIE GGGNSVRYSW ISISNEGKHN GLTDTAYWKD IDSFFNNYEF 120 LHENSNELLC KSKAQKLQER QNQQVLRSQN VGSLGCSSAL PIPPLENAQT GLLPPTDNKE 180 SMESQKLSTE QFLRLVGERF VKFSSQKFIN LNIFMHLYNS SLSNLSTQDK QDVEVAQLLL 240 AAAEKVGYKQ LDQARRLLGN CQWIASSAST PIRRSIHYFA EALLERINLM QGIAERIPNP 300 IVQLKITAVE TIDKLSSEKT GKRLQNFAGT MISKSICLKN LMTVMRRINP SIMLVSEVEA 360 KHNSPSFVNR FIESLFYYTA LLDSIAEGMA QDNKNRMEIE SVIYCEGIHS IVAAEGCERV 420 TRNVPISVWR AFFARFGLVE LELSTASAYQ ACLIVDLFNC GKSCTLDANS KCLFVGWKGT 480 PLFSLSAWKF NGQRSKSSLS I*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MVHNAYNYEK ESVMDRAYKR NIVWIPNVIP STRLYYTIIQ RLEGGIVSSQ TRRTAATFSI  60
LKGFHVNNGR SLLQFLKQIE GGGNSVRYSW ISISNEGKHN GLTDTAYWKD IDSFFNNYEF  120
LHENSNELLC KSKAQKLQER QNQQVLRSQN VGSLGCSSAL PIPPLENAQT GLLPPTDNKE  180
SMESQKLSTE QFLRLVGERF VKFSSQKFIN LNIFMHLYNS SLSNLSTQDK QDVEVAQLLL  240
AAAEKVGYKQ LDQARRLLGN CQWIASSAST PIRRSIHYFA EALLERINLM QGIAERIPNP  300
IVQLKITAVE TIDKLSSEKT GKRLQNFAGT MISKSICLKN LMTVMRRINP SIMLVSEVEA  360
KHNSPSFVNR FIESLFYYTA LLDSIAEGMA QDNKNRMEIE SVIYCEGIHS IVAAEGCERV  420
TRNVPISVWR AFFARFGLVE LELSTASAYQ ACLIVDLFNC GKSCTLDANS KCLFVGWKGT  480
PLFSLSAWKF NGQRSKSSLS I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03450.1	9e-26	GRAS family protein