PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014031.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 275aa    MW: 30275.9 Da    PI: 9.8177
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014031.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer113.11.4e-3548105359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  +v+YkeClkNhAaslGghavDGCgEfmps++++ +++++lkCaACgCHRnFHRre+e+
  Oeu014031.1  48 TVTYKECLKNHAASLGGHAVDGCGEFMPSPTATtTDPTSLKCAACGCHRNFHRREPED 105
                  799***************************999899*******************986 PP
2Homeobox14.17.9e-05184239152
                  TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrR 52 
                  +r+Rt+f++ q e + ++ e    k ++ ++++ ee  +++g+t+++ kvW +N +
  Oeu014031.1 184 KRSRTKFSQGQKEKMYSFSEklgwKLQKCDETAAEEFCRQIGVTKAVLKVWMHNNK 239
                  79*************98777777779****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDLTSNPTSS TSPNDAEKDL NLLSITNGAL NKHLGRRRHH QLPPLPSTVT YKECLKNHAA  60
SLGGHAVDGC GEFMPSPTAT TTDPTSLKCA ACGCHRNFHR REPEDTSTAT PHFLDLRHHP  120
PLPPIRYSPS PSSSPSPSPS QPSKTPPYAT RMLLSLSTAM PEDHQQAPVT PKAFKTDNLS  180
GGRKRSRTKF SQGQKEKMYS FSEKLGWKLQ KCDETAAEEF CRQIGVTKAV LKVWMHNNKN  240
TFAKREIKNT TTTNNNNIVN DDENKNINRS SSSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.17e-53ZF-HD family protein