PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014001.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HB-other
Protein Properties Length: 263aa    MW: 29767.2 Da    PI: 4.6446
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014001.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox33.47.8e-112042461153
                  HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
     Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                   +e L  +F++n  p ++ re L+k+lg++ ++V  WF+N R+
  Oeu014001.1 204 AIEKLRHVFAENELPARAVRENLSKQLGIEFDKVNKWFKNTRY 246
                  6899*************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MKAGFANFVR DVFKEEAILP DGKDSMSFPE QEWPSDDSED IDYDPERIEP SCSDSMASSE  60
SDGSEYSSSL LGSLEDEPYF LSVGNEERKK ECLDFYSDLN GVDSDEITYG EAICGRRQRS  120
TVDYLKLHDE MFGRNAAEDV QISEDEDWGP TKRKRKGKET DAGGILMTLS ETQKNCSKEK  180
PKEIDGKLSS GKMKRPIFRL PLNAIEKLRH VFAENELPAR AVRENLSKQL GIEFDKVNKW  240
FKNTRYLALK ARKASSLNFQ VV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1152182KRKRKGKETDAGGILMTLSETQKNCSKEKPK
2153183KRKRKGKETDAGGILMTLSETQKNCSKEKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.14e-44HB-PHD family protein