PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu013805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 378aa MW: 41879.8 Da PI: 8.8174 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.9e-19 | 202 | 250 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr+++ +g+WvAeIr p++ r+r++lg+f+taeeAa a++ a+ l+g Oeu013805.1 202 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAVAYDTAAYILRG 250 8******9.**********955...5**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MKSSSSLPDR VLSSSESSSP INEASATTLN YGFSEENLLK EDHQYHAHSF LPGLNPVNQN 60 GSSIEGINYV PLNFLESFPA LNKAQASEPC SSSPSLSINS RFPNLGLFLQ SPSYSQIPLF 120 SMPQLDQNQL QTGKEWLKMN QNLTNYSSKG FSDYWLSTTK TQPMKFTGRT RYESGKRVRN 180 GNASLLGVSV QRSGSSSSGK LFRGVRQRHW GKWVAEIRLP RNRTRVWLGT FDTAEEAAVA 240 YDTAAYILRG DYAHLNFPDL KHQIKTNSKN NNTAALLEAK LRAISQGITA SNKAIDHEQK 300 AIFLQEDSMV NGNLKQKSSS GKEWPLMDLE SKAGVDQVIE SKKNNQEGLS DIDTVQLSRM 360 PSLDMDTIWD ALLVSDS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 2e-59 | ERF family protein |