PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013788.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 296aa MW: 31599.4 Da PI: 9.2205

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013788.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00057	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k F++ L H +H Oeu013788.1 124 FKCSVCNKAFPSYQALGGHKASH 146 89**********99999998887 PP
2	zf-C2H2	13.9	0.00016	185	207	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k+F++ L H r+H Oeu013788.1 185 HKCTICHKVFPTGQALGGHKRRH 207 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MAFKAMNSQA APSAPPMPAA LRYEEVDANR TKGKRSKRSG NVANHTDDDD EVLAFSLMML 60 SRGASCTDGA TNRPTVETKN DNKPVPITSK HTTAEKIHTD EKKTINLSSS PSTGVVEVQP 120 QNPFKCSVCN KAFPSYQALG GHKASHGIKY SSTTATASKD GHLSPSTSAI TASNTTSLKL 180 TVKLHKCTIC HKVFPTGQAL GGHKRRHYEG VIGGGNKSSI TSSEGAASRS QSQSCGHGHG 240 HTVRDFDLNL PASPEIGLDL IPYRPEEKTQ LIISEQEQEV ESPLPVSVNK SRLFH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	4e-30	C2H2 family protein