PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013599.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 163aa    MW: 18264 Da    PI: 6.0106
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013599.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000245576223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                 +C++C+k+F ++  +  H++ H
  Oeu013599.1 55 ECQYCSKVFENSQAFGGHQNAH 76
                 7**************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
METRNGDGES SCSEKKLIRL FGFEIDPCQT NDQGGFVEGH ESVNFEAQQN KKKLECQYCS  60
KVFENSQAFG GHQNAHKKER LRKKKLQLQP RKFFMQPDPI NLYYEHSSTT AGGGGGGGAW  120
STAFLNDQSQ ITCDQDADQV NGQEVYAASH APFQQDTEYR RE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.19e-10C2H2 family protein