PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013461.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 829aa    MW: 90926 Da    PI: 6.4631
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013461.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.91.5e-172482357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 k  ++t+eq+e+Le+++ ++++ps  +r++L + +    +++ +q+kvWFqNrR +ek+
  Oeu013461.1 24 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRGCpilsNIEPKQIKVWFQNRRCREKQ 82
                 56789****************************************************97 PP
2START137.91e-431633632204
                  HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
        START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97 
                  +aee+++++++ka+ ++  Wv+++ +++g++++ +f+ sk++ g a+ra+g        l +e+l+d+  W ++++++e+      g  g+++l +++
  Oeu013461.1 163 IAEETLADFLSKATGTAVDWVQMPGMKPGPDSVGIFAISKSCGGVAARACG--------LIAEILKDRSSWFRDCRSVEVFTMFPAGngGTIELVYTQ 252
                  68999*******************************887777777777776........6677888888**************999999********* PP

                  XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHH CS
        START  98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglae 191
                  ++a+++l+p Rdf+++Ry+ +l+ g++vi+++S++ +   p+    +++ Rae+lpSg+li+p+++g+s +++v+h +lk+++++++lr+l++s  + 
  Oeu013461.1 253 TYAPTTLAPaRDFWTLRYTTTLENGSLVICERSLSGTGAGPStvaAPQFLRAEMLPSGYLIRPCEGGGSIIHIVDHLNLKASSVPEVLRPLYESPNIL 350
                  ************************************9999998999**************************************************** PP

                  HHHHHHHHTXXXX CS
        START 192 gaktwvatlqrqc 204
                  ++k++ a+l++ +
  Oeu013461.1 351 AQKMTIAALRYIR 363
                  ********99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 829 aa     Download sequence    
MAMVAQLHRE SSSGSINKHL DSGKYVRYTA EQVEALERVY SECPKPSSLR RQQLIRGCPI  60
LSNIEPKQIK VWFQNRRCRE KQRKESVRLH SVNKKFSAMN KLLMEENDRL QKQVSQLVCE  120
NGYMRHQLQS ASATTTDASC ESAATTPRHV LKDTNNPAGL LLIAEETLAD FLSKATGTAV  180
DWVQMPGMKP GPDSVGIFAI SKSCGGVAAR ACGLIAEILK DRSSWFRDCR SVEVFTMFPA  240
GNGGTIELVY TQTYAPTTLA PARDFWTLRY TTTLENGSLV ICERSLSGTG AGPSTVAAPQ  300
FLRAEMLPSG YLIRPCEGGG SIIHIVDHLN LKASSVPEVL RPLYESPNIL AQKMTIAALR  360
YIRQIAQETS GEVAYGLGRQ PAVLRTFSQR LSRGFNDAIN SFNDDGWSLL NSDGAEDVVV  420
AINSSKNLSA GSNNLSFIGG VLCAKASMLL QNVPPAVLVR VLREHRSEWA DFTVDAFSAT  480
SLKARLYAYP GMRPTGFTGS QIIMPLGNTI EHEEMLEVIR LEGHSLGEED AFISRDIHLL  540
QMCSGVDENA VGACSELVFA PIDEIFPDDV PLVPSGFRII PLDSKPDTLT AQRTLDLTSN  600
LEVDPETNHG AGNATSSYSA RSVLTIAFQF PFESNLQDNV ATMARQYVRS VISSVQRVSM  660
AISPLGLSPT FGPKLSPGSP EAITLAHWIC QSYSFHVGTE LVMADTIGAE SILKTLWRHQ  720
DAILCCSLKV LPVFIFANQA GLDMLETTLV ALQDITLDKI FDDAGRKALF SEFTKIMERG  780
FAYLPGGICM STMRRHISYE QAIVWKVFAA EENTLHCLAF SFVNWSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein