PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu013370.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 456aa MW: 49660.8 Da PI: 7.4486

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu013370.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.1	3.5e-24	153	197	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e+ Oeu013370.1 153 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKSRPRSRKPVET 197 79****************************************997 PP
2	QLQ	49.4	1.4e-17	94	129	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q+q+L++Q ++yKy++a+ P+Pp+Ll+++++ Oeu013370.1 94 LFTGTQWQELERQTMIYKYILASIPIPPQLLLQLSN 129 6*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MQVQPTESST CKRAMVFPHY YQLSSSQKNS FFGVGGGGGG GGSGRANFYN TNYNEAVGCV 60 NNIYDSMGGG GEVFPRSSDN SAFKGAMIMS GKALFTGTQW QELERQTMIY KYILASIPIP 120 PQLLLQLSNA PILTHAFQSK TSGLDLRFSS GSDPEPWRCR RTDGKKWRCS RDVAPDQKYC 180 ERHAHKSRPR SRKPVETQSL NTTTNNYSQQ SLLLPPNTTT QNSMDFANPY DQTRCTEWLM 240 GSVSSSGTIP VSTCNQQWHQ LMQSSSKVEY LNRDNTVQNE NNVSTFQYDD KQDFMNLFLD 300 HPKLAYLQGN LDLNTEKTQT TRRFIDERST GEKDGDEGSA ASLNKKMFSP SSLTLSMSRG 360 IGIGDDNDHN AAIGIGTMKT VKENDGFLNS VSWMNSPQGG PLGEALGLGN STAGGGGKGC 420 SDLASPHGYS NSTANSSNCS KSSCEDGSYA HNFIG*

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MQVQPTESST CKRAMVFPHY YQLSSSQKNS FFGVGGGGGG GGSGRANFYN TNYNEAVGCV  60
NNIYDSMGGG GEVFPRSSDN SAFKGAMIMS GKALFTGTQW QELERQTMIY KYILASIPIP  120
PQLLLQLSNA PILTHAFQSK TSGLDLRFSS GSDPEPWRCR RTDGKKWRCS RDVAPDQKYC  180
ERHAHKSRPR SRKPVETQSL NTTTNNYSQQ SLLLPPNTTT QNSMDFANPY DQTRCTEWLM  240
GSVSSSGTIP VSTCNQQWHQ LMQSSSKVEY LNRDNTVQNE NNVSTFQYDD KQDFMNLFLD  300
HPKLAYLQGN LDLNTEKTQT TRRFIDERST GEKDGDEGSA ASLNKKMFSP SSLTLSMSRG  360
IGIGDDNDHN AAIGIGTMKT VKENDGFLNS VSWMNSPQGG PLGEALGLGN STAGGGGKGC  420
SDLASPHGYS NSTANSSNCS KSSCEDGSYA HNFIG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	2e-28	GRF family protein