PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu012558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 27920.6 Da PI: 6.9788 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.3 | 7.3e-10 | 16 | 61 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r++ + rEr RRd++N+ f+eL ++ k+ +Ka+iL+ A++ +k+L Oeu012558.1 16 RKVQKADRERLRRDKLNEQFQELGNIVAKN--------DKASILTDAIQVLKDL 61 5677889********************998........8*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MSSQRGQYAD DAISPRKVQK ADRERLRRDK LNEQFQELGN IVAKNDKASI LTDAIQVLKD 60 LTSEVSKLKT EHTVLHEESL ELTQEKNDLR EEKASLKSDV ENLNAQYEQA LRFMIPWGAV 120 NPSITMAPPF SYPVGPLPFP PGPIPMHPTI PPFPNPNPIL SYIPYPTPVV PLLDHPTTLN 180 ASTSFISSRQ DSISRISDQY RSSTSQKAVN SNNVVTDLEL KIPGSTVQKE VSSGEKNGKQ 240 PMSDEKKLYK * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 1e-50 | bHLH family protein |