PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu012534.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 389aa MW: 43894.2 Da PI: 8.1563

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu012534.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.7	2.9e-20	115	223	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE.........EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliy.......rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae+ + +++ ++l +d++ +W++++ + +++++r++lt+GW+ Fv+a++L +gD+++F Oeu012534.1 115 FCKTLTASDTSTHGGFSVPRRAAEKVfppldftQTPPA--QELFARDLHDVEWKFRHVFrdyneihTGQPKRHLLTTGWSVFVSAKRLIAGDSILFI- 209 99***************************7655544..48***********999999999999999*********************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 ++++ +l+++++r+ Oeu012534.1 210 -WNEKNQLLLGIRRA 223 .8889999*9996 PP
2	Auxin_resp	115.4	4.9e-38	248	331	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+v+YnPras+seFv++++k++ka++ + vsvGmRf+m fet++s rr++Gtv+g+ ldp+rWpnS+Wrs+k Oeu012534.1 248 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVYhTCVSVGMRFRMLFETDESTVRRYMGTVTGIGYLDPTRWPNSHWRSVK 331 79*******************************95679***************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEGEKKCLNS ELWHACAGPL VSLPMVGSRV VYFPQGHSEQ VSATTNKEVD AHIPHYPGLP 60 PQLICQLHNV TMHADIDTDE VYAQMTLQPL TREAQEDTYL PVELGIPSRQ PTNYFCKTLT 120 ASDTSTHGGF SVPRRAAEKV FPPLDFTQTP PAQELFARDL HDVEWKFRHV FRDYNEIHTG 180 QPKRHLLTTG WSVFVSAKRL IAGDSILFIW NEKNQLLLGI RRAVRPQTVM PSSVLSSDSM 240 HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPLSKYVK AVYHTCVSVG MRFRMLFETD 300 ESTVRRYMGT VTGIGYLDPT RWPNSHWRSV KVGWDESTAS ERQPRVSLWE IEPLTTFPMY 360 PSLFPLRLKR PWYPGASSLQ GMLLSKIY*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEGEKKCLNS ELWHACAGPL VSLPMVGSRV VYFPQGHSEQ VSATTNKEVD AHIPHYPGLP  60
PQLICQLHNV TMHADIDTDE VYAQMTLQPL TREAQEDTYL PVELGIPSRQ PTNYFCKTLT  120
ASDTSTHGGF SVPRRAAEKV FPPLDFTQTP PAQELFARDL HDVEWKFRHV FRDYNEIHTG  180
QPKRHLLTTG WSVFVSAKRL IAGDSILFIW NEKNQLLLGI RRAVRPQTVM PSSVLSSDSM  240
HIGLLAAAAH AAATNSCFTV FYNPRASPSE FVIPLSKYVK AVYHTCVSVG MRFRMLFETD  300
ESTVRRYMGT VTGIGYLDPT RWPNSHWRSV KVGWDESTAS ERQPRVSLWE IEPLTTFPMY  360
PSLFPLRLKR PWYPGASSLQ GMLLSKIY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein