PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu012476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 257aa MW: 28474.3 Da PI: 7.7567 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 75 | 97 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H Oeu012476.1 75 FTCSFCKREFSTSQALGGHQNAH 97 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MKEKIEEGSD SKPELTSRVE LDLKLAANDE MSNKNNGAAA SNLELNLFNS LNSVSSPASE 60 SSNDGSKCRF QTKTFTCSFC KREFSTSQAL GGHQNAHKQE RALAKRRHGV VEEAAAATPF 120 GHYPAYSYHP YTFPQVPFYG SFNRSSLGVR PNSMIHKQSY NPYGIRFGHE NISRAFFMNP 180 NLKGLSYNQI SGRFGHEKFE GRGSILDLGD KHVDLDHHNS STSKGNEDNN QRLRLGNVNG 240 DHQTDDESGL DLNLKL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 6e-25 | C2H2 family protein |