PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012424.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 254aa    MW: 28083.9 Da    PI: 8.4578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012424.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.6e-08156196954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Oeu012424.1 156 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 196
                  699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDIDFIKSAS EDDQMEMMLM QMDKLSEFSG PYADINDMSL MEYGAHNGTN IGSIPQVVDD  60
NSASSFMNLP SNISFSGSGS PIIHQDPSAM PFLPNSSGGR WKIVGDEAQK RNSMAAMREM  120
IFRIAAMQPI HIDPESVKPP KRRNVKISTD PQSVAARHRR ERISERIRIL QRLVPGGTKM  180
DTASMLDEAI HYVKFLKNQV QSLERAAANR PTGIGFPVPM SSGSYFPAAS KNYQSPSQSL  240
QHFADACRKL TEK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.14e-42bHLH family protein