PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011874.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 611aa MW: 68526.6 Da PI: 7.3394

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011874.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	64	106	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 rg +++eE l++d+++ lG++ W+ Ia++++ gRt++++k++w+ Oeu011874.1 64 RGCFSPEEVALIIDLHNILGNK-WAQIAKHLP-GRTDNEVKNFWN 106 899*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MAPGQHTCCD KQKVKTGLWS PEEDEKLIRH ISAFWPRLLE CRLQRCGKSC RLRRINYLRP 60 DLRRGCFSPE EVALIIDLHN ILGNKWAQIA KHLPGRTDNE VKNFWNSSIK KKLMATYLSN 120 LARSNFQGLS SMNFNSYQIP TAHMTQVYIP PATPNNPLPG FDQVNFNTNL IPALTSFPIL 180 SMDSSAYNLP PLAWMTSEYH QPQLVDHLQQ FIKQEDTSMF FNGGPAAQQF FNAPPLIRTY 240 VDTSVINGQP KLCEMTNGNQ FGMYSSVPPV LEPVSKGFSG FPSALYAPEM QVPVVGHIQF 300 IQSLIHFPAK SSLFALAKTI GVSLRIDEAT SDLCHPSKVR TVLCDKKLDY CFWCRHFGHI 360 DEHCSFGSCP VPPCVTVEDF NPRNTVNQPK DKEKGKEFTP PIAMVNILAP ESKHTQVQSV 420 APLIRTTEST IQPVLSSVAP QFYSASSPAS TIDATTVVSP EVIRPTLALH FYPLVDFMIR 480 KSQTSDDLEY TDIVAIQITV PPSVRTQAPI VDLMDGQRMT SSSELHGRNT RGLLTFHILV 540 GGSLGVSHMV PPHIPSSYEC HHMECDRYLC FDTGIQNELN KVLVFWNVET SAIVHHDHPQ 600 FLHVEMKIRD *

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MAPGQHTCCD KQKVKTGLWS PEEDEKLIRH ISAFWPRLLE CRLQRCGKSC RLRRINYLRP  60
DLRRGCFSPE EVALIIDLHN ILGNKWAQIA KHLPGRTDNE VKNFWNSSIK KKLMATYLSN  120
LARSNFQGLS SMNFNSYQIP TAHMTQVYIP PATPNNPLPG FDQVNFNTNL IPALTSFPIL  180
SMDSSAYNLP PLAWMTSEYH QPQLVDHLQQ FIKQEDTSMF FNGGPAAQQF FNAPPLIRTY  240
VDTSVINGQP KLCEMTNGNQ FGMYSSVPPV LEPVSKGFSG FPSALYAPEM QVPVVGHIQF  300
IQSLIHFPAK SSLFALAKTI GVSLRIDEAT SDLCHPSKVR TVLCDKKLDY CFWCRHFGHI  360
DEHCSFGSCP VPPCVTVEDF NPRNTVNQPK DKEKGKEFTP PIAMVNILAP ESKHTQVQSV  420
APLIRTTEST IQPVLSSVAP QFYSASSPAS TIDATTVVSP EVIRPTLALH FYPLVDFMIR  480
KSQTSDDLEY TDIVAIQITV PPSVRTQAPI VDLMDGQRMT SSSELHGRNT RGLLTFHILV  540
GGSLGVSHMV PPHIPSSYEC HHMECDRYLC FDTGIQNELN KVLVFWNVET SAIVHHDHPQ  600
FLHVEMKIRD *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	3e-55	MYB family protein