PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011421.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 499aa MW: 54789.7 Da PI: 8.137

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011421.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.4	2.6e-40	25	101	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls +++yhrrhkvCe+hsk+p+v++ g+e rfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+ Oeu011421.1 25 CSVDGCNADLSLCRDYHRRHKVCEIHSKTPKVMIGGRELRFCQQCSRFHSLIEFDEGKRSCRKRLDGHNRRRRKPQP 101 **************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MASSSFSGSS KRAKAPGNII QVAHCSVDGC NADLSLCRDY HRRHKVCEIH SKTPKVMIGG 60 RELRFCQQCS RFHSLIEFDE GKRSCRKRLD GHNRRRRKPQ PDSVSRTSGL VFPSQPAVSG 120 SRLLSFSTPL VLPNTVMSSS CAGLVKPENE TGLYNIQQLS NYIERQNSYP ECSASYKGVN 180 QLQFAQEEAS IYQHPVFYPN AASANTNIGP STFSNGLNQV VDSDRALSLL SSTTPVTRDF 240 GLNHVVPPKS IPRADSFIHN LHYSSLGQYQ FPQEIESKPV VSARDSPGSN ASSLRFQDMF 300 QNGTEGTYIC DCLLTDVRTY DSNCLLRGYV YSRVLNLVLM LYASLTFGVG VESPTFRLRS 360 VCVNIAXMLY ASLTFGVGVE SPTFRLRSVC VNIAENYHQL IMCIANEIAF HLNNQVQIQD 420 ELAGGAAKPS PAMQCTVAAT TTTIKLPTQK VAFTEKGDFG VSEGYVHGPN GGAGDELVDA 480 KATSFIFHVK ERLRLEEE*

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MASSSFSGSS KRAKAPGNII QVAHCSVDGC NADLSLCRDY HRRHKVCEIH SKTPKVMIGG  60
RELRFCQQCS RFHSLIEFDE GKRSCRKRLD GHNRRRRKPQ PDSVSRTSGL VFPSQPAVSG  120
SRLLSFSTPL VLPNTVMSSS CAGLVKPENE TGLYNIQQLS NYIERQNSYP ECSASYKGVN  180
QLQFAQEEAS IYQHPVFYPN AASANTNIGP STFSNGLNQV VDSDRALSLL SSTTPVTRDF  240
GLNHVVPPKS IPRADSFIHN LHYSSLGQYQ FPQEIESKPV VSARDSPGSN ASSLRFQDMF  300
QNGTEGTYIC DCLLTDVRTY DSNCLLRGYV YSRVLNLVLM LYASLTFGVG VESPTFRLRS  360
VCVNIAXMLY ASLTFGVGVE SPTFRLRSVC VNIAENYHQL IMCIANEIAF HLNNQVQIQD  420
ELAGGAAKPS PAMQCTVAAT TTTIKLPTQK VAFTEKGDFG VSEGYVHGPN GGAGDELVDA  480
KATSFIFHVK ERLRLEEE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	99	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	7e-43	SBP family protein