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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010862.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 254aa MW: 27685.6 Da PI: 4.6737 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.7 | 8.5e-11 | 2 | 36 | 12 | 48 |
HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Oeu010862.1 2 IIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 36 5788899****.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MIIHLQALLG NRWAAIASYL PQRTDNDIKN FWNTHLKKKL KKQQGNDEQN QEGSSDSQSI 60 PKGQWERRLQ TDIHMAKQAL CEALSLDKWN TNLLDSKPFP VTLSETKPIQ TSTYASSTEN 120 IARLLQNWTK KSPNSSQAGS SQSTTQTSFN NPSIGTSSSP SEGTISATTP EGFDSFMGFS 180 SSNSDVSQSE GEPKVNAANF IPEAGTLQGE SKINLDIQMP LTLLENWLFD DASAQGGGGY 240 IMDMSLGENA DLF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.2 | 5e-48 | MYB family protein |