PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu010819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 234aa MW: 25968.3 Da PI: 10.4189 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.7 | 7.1e-32 | 70 | 126 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++Il+RR+ Rakle++kkl k+rkpylheSRh+hAl+R RgsgGrF Oeu010819.1 70 DGPIYVNAKQYHGILRRRKIRAKLEAQKKL-VKTRKPYLHESRHRHALNRVRGSGGRF 126 57****************************.**************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 234 aa Download sequence |
MKSAVFFGNP DFSISAHSKI SQSTMPIPYA HSDSYFSGLF TAYGPHTLIQ PQMMGASSAR 60 VPLPVDLSED GPIYVNAKQY HGILRRRKIR AKLEAQKKLV KTRKPYLHES RHRHALNRVR 120 GSGGRFLSKK QPQQSDCLYP NNSQAQAQAQ AQAHQDSLHF NQIGDILNAD AREIKTNKHD 180 VPTTTCTERT RIASADVIFP LAEGRFPPHT AVSMQGGSNL EYSGNRHYAS TVR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G54160.1 | 2e-38 | NF-YA family protein |