PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010432.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 325aa MW: 35191.4 Da PI: 7.4981

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010432.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	8.9e-05	19	41	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ CgksFs+ L H +H Oeu010432.1 19 YICSVCGKSFSSYQALGGHKTSH 41 89**********99998888777 PP
2	zf-C2H2	16.1	3.1e-05	68	90	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+++F++ L H+r+H Oeu010432.1 68 HKCNVCNQTFTTGQALGGHMRRH 90 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MEPFPPAIVA SPLDQNMPYI CSVCGKSFSS YQALGGHKTS HRDRSQFATT AITSNSNISY 60 LNPSGRIHKC NVCNQTFTTG QALGGHMRRH YEGEIKGGKK TSGVTSRGGA SSQCNSNGRT 120 STVDFNLNQP ALLETYSDFT LYIRQNIQTH PTTTFSHSLL HKAGYGPVQY DYNENRTKSE 180 IFELIITRNG DGITIALCND DGICTSMMVS ATLTFSKATI DRPINVHSSD QFLHPIDGDG 240 RFGDFVGWGG GYGVWWQWWM LMQGIGVANR SGGSGCWNWR LGMGFAMMCV VEVVAVAVKC 300 DSSDGVSGDS HRGGYGWDGM GVGL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19580.2	7e-22	C2H2 family protein