PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu010307.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CPP

Protein Properties

Length: 726aa MW: 79086.2 Da PI: 6.4075

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu010307.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.6	3.9e-16	443	481	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk Oeu010307.1 443 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCSCMDCFNKP 481 589**********************************96 PP
2	TCR	51.4	2.2e-16	528	566	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN Oeu010307.1 528 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNV 566 589***********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MQDSPVFNFL NNLSPIEPVK SIHITQTINP LSFASIPSVF TSPHVSSLKG SRFLKRHQLA 60 DPSKPEFATN GGKIIDKNDP IIDGANKSDR THENHNPEDE AIYQPSYECS KLEIELGQSL 120 VYDSRCSLLS AKHSAECAYT SSTFVPFIQE ASQKGLYGSG ENEEGVNQID QDKEATGCDW 180 ESFISDATDP LIFESPINAE FCKKSVQSGE NFYANVSNNM QNTLSFSEAG SGEQVGEGSE 240 TENPSSQLGE GSELKKIAET HDTVAGCSTS NPSENMDNEP ESGLYRGVRR RCLVFETARA 300 LRKHLDKNSD SDTPLFMQSD GNTSSSDGQQ ISPKDGSDSS RCVLAGIGLH LNALTTTPKG 360 YKFVAKFRPP ASQEELLNNS LAVTMLDREI STVENGVPPV EDDSQASRYI VNEEIAQTSP 420 KKKRHVPCIA YLSKLELAGE GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCSCMDCFNK 480 PVHEDTVLAT RKQIESRNPL AFAPKVIKGS DSLCETRNDS SKTPASARHK RGCNCKKSGC 540 LKKYCECYQG GVGCSINCRC EGCKNVFGRK DGTEVELDED EGDITEKSMG DKSLQKTAIQ 600 INLVQNPDSA LPATPLQFGR SSVQHPFSSK NKPPRSFPSI GSSFGKTGNF VARSKSDKHF 660 ETVQEDEMPE FGQGGSPNRG IKSSSPNSKR VSPHQSGLGT SPEVRRGRKL ILQSIPSFPS 720 LTPKH*

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MQDSPVFNFL NNLSPIEPVK SIHITQTINP LSFASIPSVF TSPHVSSLKG SRFLKRHQLA  60
DPSKPEFATN GGKIIDKNDP IIDGANKSDR THENHNPEDE AIYQPSYECS KLEIELGQSL  120
VYDSRCSLLS AKHSAECAYT SSTFVPFIQE ASQKGLYGSG ENEEGVNQID QDKEATGCDW  180
ESFISDATDP LIFESPINAE FCKKSVQSGE NFYANVSNNM QNTLSFSEAG SGEQVGEGSE  240
TENPSSQLGE GSELKKIAET HDTVAGCSTS NPSENMDNEP ESGLYRGVRR RCLVFETARA  300
LRKHLDKNSD SDTPLFMQSD GNTSSSDGQQ ISPKDGSDSS RCVLAGIGLH LNALTTTPKG  360
YKFVAKFRPP ASQEELLNNS LAVTMLDREI STVENGVPPV EDDSQASRYI VNEEIAQTSP  420
KKKRHVPCIA YLSKLELAGE GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCSCMDCFNK  480
PVHEDTVLAT RKQIESRNPL AFAPKVIKGS DSLCETRNDS SKTPASARHK RGCNCKKSGC  540
LKKYCECYQG GVGCSINCRC EGCKNVFGRK DGTEVELDED EGDITEKSMG DKSLQKTAIQ  600
INLVQNPDSA LPATPLQFGR SSVQHPFSSK NKPPRSFPSI GSSFGKTGNF VARSKSDKHF  660
ETVQEDEMPE FGQGGSPNRG IKSSSPNSKR VSPHQSGLGT SPEVRRGRKL ILQSIPSFPS  720
LTPKH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	421	453	KKKRHVPCIAYLSKLELAGEGEACKRCNCKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-142	CPP family protein