PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu010178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 186aa MW: 20500.1 Da PI: 8.7355 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 146.3 | 8.7e-46 | 9 | 108 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv kll++l++++reda++sl+yeAe+r+rdPvyG+vgvi+ lq+ql+ql+++l ++k Oeu010178.1 9 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVAKLLNELQPQQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQTDLRYAK 106 7**********************************************************************************************999 PP DUF260 99 ee 100 +e Oeu010178.1 107 SE 108 87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
MASSSSNSPC AACKFLRRKC QPECVFAPYF PPDQPQKFAN VHKVFGASNV AKLLNELQPQ 60 QREDAVNSLA YEAEMRLRDP VYGCVGVISL LQHQLRQLQT DLRYAKSELS KYQNLGMTGH 120 GLIAAATHHH SGINLIGSGA SSRDHHFHHR FFPGNPQQII RAFDGNNSYD ASSILFSQFP 180 TGDGK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G65620.3 | 4e-67 | LBD family protein |