PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010021.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 364aa    MW: 40100.2 Da    PI: 5.4561
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010021.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.61.5e-17274307134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C  tkTp+WR gp g+k+LCnaCG++y++ +
  Oeu010021.1 274 CMHCEITKTPQWRAGPMGPKSLCNACGVRYKSGR 307
                  99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MTGPNCMDEN DCGNFFDQID DLIEFPPDNE YGDDNLVESG DCNDFACILN DPLPDSDPLF  60
FNSKCNSVSD LSAELSVPAL AERVMDWSLN MRCCSCRNGE DWSFNYEDIV QLEWLSTFME  120
DSFSGAGMTL GKENLHVDKE PSHQQFHTSS PVSVLESLST SSSSSCSVGK IMPLDPSQRG  180
PHCARSKRPR LPTFKPQAGI QLISPSSSFI EAPQPFATPI VSSDSENFAE SQPMEKIMKP  240
VRAEQKKKRK IKSFVPVGPM EVNRNPPAQA VRKCMHCEIT KTPQWRAGPM GPKSLCNACG  300
VRYKSGRLFP EYRPAASPTF VPLLHSNSHK KVIEMRTKGG AETTAITSTT IKSESFSNAS  360
LSY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-40GATA family protein