PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009953.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 814aa MW: 89891 Da PI: 4.6232

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009953.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.1	3.8e-09	178	218	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +rRR++iN L+ l+P++ K +Ka +L +A+eY+k+ q Oeu009953.1 178 QRRRSKINGNTKSLQNLIPNS-----NKTNKALMLDEAIEYLKQHQ 218 79****************7.....5**************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MSILDIFAPL KNLKYPTASA FEEPRRSKVH ISFKSKPAVI NSPSTSLPAY PRSYSLFLSS 60 SLCGRCIRRA KKVESPHLFE VEACRHQLTI HAAACVALPY RHYMNLMRSL SINSKFCKSC 120 NLRKKVGVLS CLDLKALVEE ALSKPTPRRK SSKITRVTEV YNLSQKVPCF EIMRCIWQRR 180 RSKINGNTKS LQNLIPNSNK TNKALMLDEA IEYLKQHQLQ EQIPDTFIGV LFQASRLYIP 240 ARIPTPNELS TPTLESLFFS TVSVSCVFQH QPSVLTDVHR QSVDTDVWAF EAISEIGERF 300 GHESVNDYHE FFVGPLENSH NNLHVYATLR PTDAEVEQPY LSSLVPYDDP PVPVLDDIVR 360 NVVAPQIHSL HAESGVGGQS GGQDLEDRVR SGRSGDGETS GDDESERESG SDSEGDDGED 420 TSDSSSPAGA PIRSPERGHT TNSLPVRTSA SSLTKGEVEE LLLDQKESSS RCDSGLWPHI 480 PPPPLRAQRA PFSNPVLQVV PHKMYMDEAQ THCPRQLNWE LTQDVHSLQS EHTVLHAETR 540 GSCLSKLKTC QGADIAPCPD VEHEPLSTPM YDQEDGAATE PSDAAAVSDA EIDGCNVTDG 600 EDKFIACVTT VYNTRKRSSF YDQTALRPAT TSRSCDEDFV REGEGKDFEE VIVNEVAGWQ 660 DDGHYNYKDA TIARNTLHRG ISDFISAILY YISIMSSSTG STEPFNMDEP MPVPGFSPLF 720 PIYISSDDDE IELRMGRRAI FPVRFPNLED VGSDDGLSQN DVLDAVLSVD AAYEGESEDD 780 DGLAYVPENE IIIISSDESG DDSGGASSVV DNE*

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MSILDIFAPL KNLKYPTASA FEEPRRSKVH ISFKSKPAVI NSPSTSLPAY PRSYSLFLSS  60
SLCGRCIRRA KKVESPHLFE VEACRHQLTI HAAACVALPY RHYMNLMRSL SINSKFCKSC  120
NLRKKVGVLS CLDLKALVEE ALSKPTPRRK SSKITRVTEV YNLSQKVPCF EIMRCIWQRR  180
RSKINGNTKS LQNLIPNSNK TNKALMLDEA IEYLKQHQLQ EQIPDTFIGV LFQASRLYIP  240
ARIPTPNELS TPTLESLFFS TVSVSCVFQH QPSVLTDVHR QSVDTDVWAF EAISEIGERF  300
GHESVNDYHE FFVGPLENSH NNLHVYATLR PTDAEVEQPY LSSLVPYDDP PVPVLDDIVR  360
NVVAPQIHSL HAESGVGGQS GGQDLEDRVR SGRSGDGETS GDDESERESG SDSEGDDGED  420
TSDSSSPAGA PIRSPERGHT TNSLPVRTSA SSLTKGEVEE LLLDQKESSS RCDSGLWPHI  480
PPPPLRAQRA PFSNPVLQVV PHKMYMDEAQ THCPRQLNWE LTQDVHSLQS EHTVLHAETR  540
GSCLSKLKTC QGADIAPCPD VEHEPLSTPM YDQEDGAATE PSDAAAVSDA EIDGCNVTDG  600
EDKFIACVTT VYNTRKRSSF YDQTALRPAT TSRSCDEDFV REGEGKDFEE VIVNEVAGWQ  660
DDGHYNYKDA TIARNTLHRG ISDFISAILY YISIMSSSTG STEPFNMDEP MPVPGFSPLF  720
PIYISSDDDE IELRMGRRAI FPVRFPNLED VGSDDGLSQN DVLDAVLSVD AAYEGESEDD  780
DGLAYVPENE IIIISSDESG DDSGGASSVV DNE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	2e-15	bHLH family protein