PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009813.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Protein Properties

Length: 505aa MW: 56841.1 Da PI: 8.0076

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009813.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	147	237	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k+l++s+v + ++ lp +f++ ++ ++++t+t+ede+g+++ vk+i +k++ l++GW++Fv+ n+L egD+++F+l++ +f +v ++r Oeu009813.1 147 FLKTLVRSHVASCFWMGLPMPFCK-LFLP-TKDTTVTIEDENGEEFGVKYIANKTG----LSAGWRKFVSGNKLLEGDVLIFQLVEPCRF--KVYIIR 236 89*******************5.5455.5788************777776....**********************987888..888887 PP S CS B3 99 k 99 + Oeu009813.1 237 A 237 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MRLKIVHQNQ QNRVGDDREM KKEEEMEHTH VCIRLEEEST KENSSPLNPS PISVTDPVLA 60 SGKRKRKPKE INDEMSPILR RRKKPSTSKS KDVASLFYFS CFTFCLYNGH STNDGSSSAV 120 TPVQVKSPTM IRAEEFQSSL GNEHPNFLKT LVRSHVASCF WMGLPMPFCK LFLPTKDTTV 180 TIEDENGEEF GVKYIANKTG LSAGWRKFVS GNKLLEGDVL IFQLVEPCRF KVYIIRANNL 240 TEVDGALSLL ILDSQTKQSE AAEGTADVKI RKRRPKSLPL TVVQKKKQKA GKSGQPEEQS 300 GIDSDEVASE VFGGSKCSGS SIHFKDVKSF EEFHIVVNGV CIDSELPEPV RRKYYELCCS 360 KNAFLHEGLL PGLYCKLVAG MIFEVVNTAD AIKACKLTTP RSDFEVWEKS LRSFELLGLN 420 VGFLWTRLGK LLKLAFDSEG AVDAKKYWKA KTERARTEDE IRDLEAKLVE LKEVSVKFDA 480 EIESLKSKAE RYELVFQEEV NAPW*

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MRLKIVHQNQ QNRVGDDREM KKEEEMEHTH VCIRLEEEST KENSSPLNPS PISVTDPVLA  60
SGKRKRKPKE INDEMSPILR RRKKPSTSKS KDVASLFYFS CFTFCLYNGH STNDGSSSAV  120
TPVQVKSPTM IRAEEFQSSL GNEHPNFLKT LVRSHVASCF WMGLPMPFCK LFLPTKDTTV  180
TIEDENGEEF GVKYIANKTG LSAGWRKFVS GNKLLEGDVL IFQLVEPCRF KVYIIRANNL  240
TEVDGALSLL ILDSQTKQSE AAEGTADVKI RKRRPKSLPL TVVQKKKQKA GKSGQPEEQS  300
GIDSDEVASE VFGGSKCSGS SIHFKDVKSF EEFHIVVNGV CIDSELPEPV RRKYYELCCS  360
KNAFLHEGLL PGLYCKLVAG MIFEVVNTAD AIKACKLTTP RSDFEVWEKS LRSFELLGLN  420
VGFLWTRLGK LLKLAFDSEG AVDAKKYWKA KTERARTEDE IRDLEAKLVE LKEVSVKFDA  480
EIESLKSKAE RYELVFQEEV NAPW*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	63	84	KRKRKPKEINDEMSPILRRRKK
2	63	91	KRKRKPKEINDEMSPILRRRKKPSTSKSK
3	64	85	KRKRKPKEINDEMSPILRRRKK
4	64	92	KRKRKPKEINDEMSPILRRRKKPSTSKSK
5	64	84	RKRKPKEINDEMSPILRRRKK
6	65	86	KRKRKPKEINDEMSPILRRRKK
7	79	85	LRRRKKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-34	B3 family protein