PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009687.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 276aa    MW: 30560.1 Da    PI: 10.3573
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009687.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.73.6e-10551142
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcks 42
                     +++WT eE+e +  av+++G+g+Wk I +         +R+  q+ks
      Oeu009687.1  5 KLKWTLEEEEAITAAVAKFGTGQWKNILKDPEfaprlANRSNVQLKS 51
                     689**************************999999998999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MGNPKLKWTL EEEEAITAAV AKFGTGQWKN ILKDPEFAPR LANRSNVQLK SPFGSSKQDK  60
WRSMRNRSAV NKITSGAVSN ARAQNAAASL IPVGNAVGDP SKRSLDLENA IMYKTMIFEA  120
ISSIKDPNGS NSGAIVGFIE RKYKVPQNFR KLMISVLRRL VLKGKLDKVQ DRYKIKDAAL  180
GTETPMPKER EVQPSPSQNS PSNISEKIKD ASAIAAQKIA EAQNKSLMVA EAVKEAERIS  240
EMAEDADSVL LYFKEILEQW QNFYLALGRL KFNKD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72740.22e-39MYB_related family protein