PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009446.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 504aa MW: 55705 Da PI: 7.7995

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009446.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.1e-16	95	139	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I ++g ++t+ q++s+ qk+ Oeu009446.1 95 RERWTEEEHKKFLEALKLYGRA-WRKIEGHVG-TKTAVQIRSHAQKF 139 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MVLVIGKPDI SGIWRRSLVN ALCTYVYSLN KAYSFVLGQS EGTGSDIILP TSKRTSLKVG 60 IPSTKGILLR EQLTPEAEGD FPSKVRKPYT ITKQRERWTE EEHKKFLEAL KLYGRAWRKI 120 EGHVGTKTAV QIRSHAQKFF SKVVRDSNSG DGSSVKPIEI PPPRPKKKPM HPYPRKQVSL 180 DKTAISALER PLSSVSPNLP ISGQENQSPT SVLSAIGSDD TTDSDMPNES PSPVSSAAVD 240 SGAVFCSEIA SLSSEEYKSS PGRDDIRSSP DEQAPPKLEL QYEDNALVKE ESNESGTNCL 300 KLFGKTLLVT DHQGPSYPTQ TCKMQALDRT DGTCLQTLPW TLGLLSSSSI HSECNWSGFS 360 RRLPEPFHYT ESTDNESNNV DACPVNLQCP SLFGYEQLSP LHVRSPIPIK ARPSCDRKEE 420 EKEDRKDGFL IGSNMDIGCI LSIERERKEA GSVSSRLSEK ARTKAMSCKG FVPYKRCLAE 480 RDLAASTMVT SEEREEQRIR LCL*

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MVLVIGKPDI SGIWRRSLVN ALCTYVYSLN KAYSFVLGQS EGTGSDIILP TSKRTSLKVG  60
IPSTKGILLR EQLTPEAEGD FPSKVRKPYT ITKQRERWTE EEHKKFLEAL KLYGRAWRKI  120
EGHVGTKTAV QIRSHAQKFF SKVVRDSNSG DGSSVKPIEI PPPRPKKKPM HPYPRKQVSL  180
DKTAISALER PLSSVSPNLP ISGQENQSPT SVLSAIGSDD TTDSDMPNES PSPVSSAAVD  240
SGAVFCSEIA SLSSEEYKSS PGRDDIRSSP DEQAPPKLEL QYEDNALVKE ESNESGTNCL  300
KLFGKTLLVT DHQGPSYPTQ TCKMQALDRT DGTCLQTLPW TLGLLSSSSI HSECNWSGFS  360
RRLPEPFHYT ESTDNESNNV DACPVNLQCP SLFGYEQLSP LHVRSPIPIK ARPSCDRKEE  420
EKEDRKDGFL IGSNMDIGCI LSIERERKEA GSVSSRLSEK ARTKAMSCKG FVPYKRCLAE  480
RDLAASTMVT SEEREEQRIR LCL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	5e-41	MYB_related family protein