PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu009348.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 437aa MW: 47632.3 Da PI: 9.8776

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu009348.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.6e-05	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H Oeu009348.1 83 FICEICNKGFQRDQNLQLHRRGH 105 89*******************88 PP
2	zf-C2H2	12.7	0.00038	160	182	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H + + Oeu009348.1 160 WKCEKCSKRYAVQSDWKAHSKIC 182 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MLQGMLVDDS MSNLTSASNE ASISSSNRTE IATAAYPQQS FAISSDNPTQ PPARKKRNLP 60 GNPDPEAEVV ALSPRSLLAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRNNKEVV 120 KKKVYVCPEP SCVHHDPSRA LGDLTGIKKH FSRKHGEKKW KCEKCSKRYA VQSDWKAHSK 180 ICGTREYRCD CGTLFSRRDS FITHRAFCDA LAEESARSMT QLNPLLSSQQ GTSSTPLPPH 240 LHGLQQFSLK QEQQIFKNTN PKNPSFSSGF NPSHHMSATA LLQKAAQIGV TMSSSNSKTY 300 TAQSDGIFRA HLAHMGAPGY SATSLASSTA GAGLGLSSSR EEIGTGFVNV TSAFEETFNR 360 MLNSKRGTSH LNIASKEATA AGGSGGGGAG NDGLTRDFLG LRAFPHRDFL NMAGFDPMGS 420 SSYDQQTHQN QPPWQS*

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MLQGMLVDDS MSNLTSASNE ASISSSNRTE IATAAYPQQS FAISSDNPTQ PPARKKRNLP  60
GNPDPEAEVV ALSPRSLLAT NRFICEICNK GFQRDQNLQL HRRGHNLPWK LKQRNNKEVV  120
KKKVYVCPEP SCVHHDPSRA LGDLTGIKKH FSRKHGEKKW KCEKCSKRYA VQSDWKAHSK  180
ICGTREYRCD CGTLFSRRDS FITHRAFCDA LAEESARSMT QLNPLLSSQQ GTSSTPLPPH  240
LHGLQQFSLK QEQQIFKNTN PKNPSFSSGF NPSHHMSATA LLQKAAQIGV TMSSSNSKTY  300
TAQSDGIFRA HLAHMGAPGY SATSLASSTA GAGLGLSSSR EEIGTGFVNV TSAFEETFNR  360
MLNSKRGTSH LNIASKEATA AGGSGGGGAG NDGLTRDFLG LRAFPHRDFL NMAGFDPMGS  420
SSYDQQTHQN QPPWQS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02670.1	1e-107	C2H2 family protein