PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009093.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 103aa    MW: 11444.9 Da    PI: 7.1268
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009093.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB129.21.5e-401811797
        NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                 mkk+lP nakisk+aket+qec+sefi fvt+easd+c++ekrkt+ngdd++wal++lGf+ y+e+lk +l  yre+ gek
  Oeu009093.1  1 MKKILPPNAKISKEAKETMQECASEFICFVTGEASDRCHKEKRKTVNGDDVCWALGSLGFDYYAESLKSFLYGYREAAGEK 81
                 9***************************************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MKKILPPNAK ISKEAKETMQ ECASEFICFV TGEASDRCHK EKRKTVNGDD VCWALGSLGF  60
DYYAESLKSF LYGYREAAGE KVDNNQNIKA AVSYTPFSFN VN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.14e-43NF-YB family protein