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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008954.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YA | ||||||||
Protein Properties | Length: 198aa MW: 22118.6 Da PI: 9.5851 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 99.1 | 4.5e-31 | 106 | 160 | 3 | 58 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 p++VNaKQy++Il+RRq+Rak+e+++k+ ksrkpylheSRh hA+rR Rg+gGrF Oeu008954.1 106 PVFVNAKQYHGILRRRQSRAKAESKHKV-VKSRKPYLHESRHLHAVRRVRGKGGRF 160 9***************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MTSSIHSLSD NSEADEQQKH AEPQVQSNVM SYTGIALPNM NYATSTQLGA ENAVAQTPYL 60 YSDPYYRSIF PPYDAQPYPA QPMVHHQLMG IQQAGLPLPS DAVEVPVFVN AKQYHGILRR 120 RQSRAKAESK HKVVKSRKPY LHESRHLHAV RRVRGKGGRF KKKSENQQQE VESGEESQAN 180 FNLNSDKKDP SSLESAS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 7e-48 | NF-YA family protein |