PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu008603.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 300aa    MW: 32808.8 Da    PI: 5.7488
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu008603.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.67.3e-18217250134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C++C + kTp+WR gp g+ktLCnaCG++y++ +
  Oeu008603.2 217 CTHCLVQKTPQWRTGPLGPKTLCNACGVRYKSGR 250
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MECIEARALK SSFLSQTSMK ANSQVLFNDD GWCWSGINSG PCDDFPVEDL LNLDFSDKDF  60
QEGLFLNEDG QEKGVQHRNS NSSSTFSGVD DFDNVPSGEL SVPIDDLENL EWLSQFVDDS  120
TSGVSLLCPD GSFMEKAGEF SENQIVPVSR PVVQKIRVPC FPLPVPGKAR SKRQRPNGKT  180
WSLSSPALSA AESSSTTSSS IGSSTLSPFV SQTLRRCTHC LVQKTPQWRT GPLGPKTLCN  240
ACGVRYKSGR LFPEYRPACS PTFSQDVHSN SHRKVLEMRR KKEVLGVADT GPTPINPCF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.18e-52GATA family protein