PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu008544.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 548aa MW: 59836.5 Da PI: 5.8884

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu008544.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l Oeu008544.1 34 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 81 79******************************************9986 PP
2	Myb_DNA-binding	52.8	9.1e-17	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ l++++++++G++ W++ a++++ gRt++++k++w++ Oeu008544.1 87 KGAFTPEEERLIIELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 130 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MSCSISNELS ADSALFDEGG SYGGSSNVGV VQKKGPWTSA EDAILVDYVK KHGEGNWNAV 60 QKHSGLSRCG KSCRLRWANH LRPNLKKGAF TPEEERLIIE LHAKMGNKWA RMAAHLPGRT 120 DNEIKNYWNT RIKRHQRVGL PLYPSDFCLQ AIRENQQNLN APGIPGGDTG CQNLLQSNGC 180 QTPDVMFDSL NTNQGVLPYG TEFLDGSASS LLMKGFNSQF SHFIPSMTRR QKRTREPDEF 240 ISWYSNSTSD DNPPFDRDQN DVYQNNTAQL VVPCCTYDPD PVTKKLLSFG VNHSHSILNG 300 HFSASKPTAG AMKIELPSLQ HQETSLGQWR SPPLPPVLEL VDSFIMSPQS VPLPLPPGCP 360 SPRSSGLLEA LVYEANSRGN SRNQSSEKST SSSKISCNNI TDSSALKTSS TEFGGYHDPK 420 SSLGNSSGSV LSECTPTSAT GSSLEENVPG IEQSWILDGE RRENLNQLHF SRPDALLGSC 480 WIEQSAFCSK EHGTVMDDIT SLLGDDLGTE VKDTNPGTSG LSSEWSLTWN NMPAVYQISE 540 PSMNNAL*

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MSCSISNELS ADSALFDEGG SYGGSSNVGV VQKKGPWTSA EDAILVDYVK KHGEGNWNAV  60
QKHSGLSRCG KSCRLRWANH LRPNLKKGAF TPEEERLIIE LHAKMGNKWA RMAAHLPGRT  120
DNEIKNYWNT RIKRHQRVGL PLYPSDFCLQ AIRENQQNLN APGIPGGDTG CQNLLQSNGC  180
QTPDVMFDSL NTNQGVLPYG TEFLDGSASS LLMKGFNSQF SHFIPSMTRR QKRTREPDEF  240
ISWYSNSTSD DNPPFDRDQN DVYQNNTAQL VVPCCTYDPD PVTKKLLSFG VNHSHSILNG  300
HFSASKPTAG AMKIELPSLQ HQETSLGQWR SPPLPPVLEL VDSFIMSPQS VPLPLPPGCP  360
SPRSSGLLEA LVYEANSRGN SRNQSSEKST SSSKISCNNI TDSSALKTSS TEFGGYHDPK  420
SSLGNSSGSV LSECTPTSAT GSSLEENVPG IEQSWILDGE RRENLNQLHF SRPDALLGSC  480
WIEQSAFCSK EHGTVMDDIT SLLGDDLGTE VKDTNPGTSG LSSEWSLTWN NMPAVYQISE  540
PSMNNAL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	8e-97	MYB family protein