PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008296.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | CPP | ||||||||
Protein Properties | Length: 245aa MW: 26804.2 Da PI: 9.2881 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 23.5 | 1.1e-07 | 149 | 173 | 17 | 42 |
TCR 17 YCeCfaagkkCseeCkCedCkNkeek 42 YCeCf++g++C+ C+C +C+N+ e+ Oeu008296.1 149 YCECFSSGTYCDG-CNCLNCHNNIEH 173 *************.********9775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MLDSGASFNG NVILPEHPQA QLQSKLLALS QPKKLHANAS SQSPPTVVAQ LKSPPGTVTP 60 VAPRLARPVK PMPVPRHKPT MQPIVKVASP KSRERCNMEQ MEGTPKKKKQ CNCKSSRCLK 120 LEWIIEGAGC SSIPLPVSML ICQSVLVWYC ECFSSGTYCD GCNCLNCHNN IEHESDRKDV 180 MDVIKERNPE AFKPKIANSP HKARDSMFHF WCGVIYRKSS FLGVFWSGSS VGASVLGVSI 240 GFHS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20110.2 | 3e-33 | CPP family protein |