PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008226.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | bHLH | ||||||||
Protein Properties | Length: 212aa MW: 23958.3 Da PI: 8.9143 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.6 | 5.4e-14 | 54 | 105 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + hn+ Er+RR+++Ns ++ Lr+llP + + kKls +++ + +YI +Lq Oeu008226.1 54 KLDHNASERNRRQKMNSLYSSLRSLLPAtD---QTKKLSIPATVSRLLKYIPELQ 105 678*************************66...8999**************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MLALSPPIFS NMGCFTEDPI SSHEHNNMYT ETKGLESTSF GENGTNLNFI KAKKLDHNAS 60 ERNRRQKMNS LYSSLRSLLP ATDQTKKLSI PATVSRLLKY IPELQKEVDR LIQKKEELLS 120 IKSRKEDFIY HEKSLRDGSS QSSSTSNVSV RPVGNGEILI QISSAEVRRI LVSEVLKDLE 180 ENGMVLLNAS TFQSAGMIFY YMHFQVQFVY I* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 4e-46 | bHLH family protein |