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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008093.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YA | ||||||||
Protein Properties | Length: 137aa MW: 15198 Da PI: 8.9265 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 73.2 | 5.4e-23 | 9 | 65 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+ VNaKQy++ l Rq+R k+e ekkl +k +kpylheSR +hA r++RgsgG F Oeu008093.1 9 QEPVHVNAKQYHGNLCTRQSRSKVELEKKL-IKVQKPYLHESRYQHASRKARGSGGCF 65 69****************************.*************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MILPIEMAQE PVHVNAKQYH GNLCTRQSRS KVELEKKLIK VQKPYLHESR YQHASRKARG 60 SGGCFAKTSD ADTSKETRSD SAISTQSYAL SSSKTLPSES NEMKVLKAEF SCNNDISSVR 120 KQINLSDERE EGCTSN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20910.1 | 1e-29 | NF-YA family protein |