PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu007999.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25014 Da PI: 7.8678 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 32 | 80 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++GVr ++ +g+++AeIrdp + + r +lg+f++a eAa+a++aa+ +l+g Oeu007999.1 32 FRGVRKRP-WGKFAAEIRDPQK---KVRLWLGTFDSAIEAARAYDAAAFSLRG 80 8*******.**********943...6*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MRKGKAPVAA ATARVVNGGE ANGSGGSNEI RFRGVRKRPW GKFAAEIRDP QKKVRLWLGT 60 FDSAIEAARA YDAAAFSLRG PKAKTNFPLP PDANAFPNFK PRNPNQQQIN NNPNDPFMDP 120 RFYSQDHQII AQQRPTSSSM SSTVESFSGP RQLPPPPPVF MQHRSNPRTP FDPEECHSDC 180 DSSSSVVDDA ECDIASSSCK KLLLFDLNEM PPVDAADVDE LACTALRL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50640.1 | 3e-27 | ERF family protein |