PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007935.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 359aa    MW: 40073.7 Da    PI: 10.2163
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007935.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind2883.9e-8813011293
    GAGA_bind   1 mdddgsre.rnkgyyepa.aslkenlglqlmssiaerdaki...rernla.lsekkaav......aerd.........maflqrdkalaernkalver 77 
                  md +gs++ rn+g++e+a + lk++lglqlmss+aer       ++++    s+  a++      ++r          +++ +r++++++        
  Oeu007935.1   1 MDGNGSMNlRNWGFFERAtTPLKSHLGLQLMSSMAERPLFGgdvHDQHRVpPSGVMASInggpyhHHRVggfseshipIDY-MRENWMNH-------G 90 
                  999*************99899***************975444456666521222233224444434444555555555555.55555555.......7 PP

    GAGA_bind  78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkseksk 175
                  ++k++++l+v++ + s    +++ + +t+s++s+q+ ++ +++++   ++++e+++++  +   + +  +kk+  ++  k+p e+k+ + +   +   
  Oeu007935.1  91 REKYVNNLPVNQHQ-SYYQLNYGLSAETSSAHSIQMPQQINITKNVNVIPQMEEVSKEGDNG-GSGVPLAKKRGGGKVLKSPAEEKKPRIRA--PRAP 184
                  88999999988864.4555899**************99999999988888888655544222.22222222333333344444433333333..4444 PP

    GAGA_bind 176 kkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLa 273
                  ++ +++s+ +r++a+kk  ++v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt +SvyPLP+stkrrgaRiagrKmS gafkk+LekLa
  Oeu007935.1 185 REGSSPSV-QRTRAPKKRAEVVINGINMDISGIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLA 281
                  56666665.79*************************************************************************************** PP

    GAGA_bind 274 aeGydlsnpvDLkdhWAkHG 293
                  +e y++snp+DLk++WAkH 
  Oeu007935.1 282 SEDYNFSNPIDLKSYWAKHA 301
                  *******************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MDGNGSMNLR NWGFFERATT PLKSHLGLQL MSSMAERPLF GGDVHDQHRV PPSGVMASIN  60
GGPYHHHRVG GFSESHIPID YMRENWMNHG REKYVNNLPV NQHQSYYQLN YGLSAETSSA  120
HSIQMPQQIN ITKNVNVIPQ MEEVSKEGDN GGSGVPLAKK RGGGKVLKSP AEEKKPRIRA  180
PRAPREGSSP SVQRTRAPKK RAEVVINGIN MDISGIPIPV CSCTGTPQQC YRWGSGGWQS  240
ACCTTGMSVY PLPMSTKRRG ARIAGRKMSI GAFKKVLEKL ASEDYNFSNP IDLKSYWAKH  300
AEASQVVSNW WISLLSQLMP GFWDISEFKS KKKGDAVFVE IRRGNEEERM RYWILIRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.14e-74BBR-BPC family protein