PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007884.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 605aa MW: 67782.1 Da PI: 6.521

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007884.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	430	476	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq Oeu007884.1 430 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 476 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence
MGAILWNDED KDMVAAVLGT KAFDYLISSS VLAECSLMTM GNDENLQNKL SDLVEHPNAA 60 SFSWNYAIFW QLSRSKSGDL VLGWGDGCCR EPREGEESER SRILNFRLED ETQQKMRKRV 120 LQKLHTLFGG TEEDNYAFGL DKVTDTEIFF LASMYFSFPR GEGGPGKCYG SGKYVWLSDA 180 FNFSFDYCVR SFLAKSAGMR TIVLIPTDIG VVELGSVRSV PECSELLQII RSSFSSTSSL 240 IRASQAASFP VGTSRKDGDN PKSDLVIGSR SDIVPKIFGQ DMNSGSVQFR EKLAGRNLED 300 RPWDVYANGN RLPFTHARNG FHGSSWTQLG NIKPGNSVEI YSPQTVAKNP HELVNRTKEE 360 FQLSRFQHQK PAQMQIDFTG ATSRPITSQP RNVDSQCLDA EVSCNEELSD DRRPRKRGRK 420 PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA YITELQKKLN 480 DMESEKEKFG NISHETKILE AKPNSEWQDQ PPSIDIQSGH DEIIVRVSCP LDAHPVTRVF 540 QAIKDSQATV FESKIDTDSD HVFHTFVVKS QGSERITKEK LIEAFSRESG SLPPSKSVIN 600 RNCA*

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence

MGAILWNDED KDMVAAVLGT KAFDYLISSS VLAECSLMTM GNDENLQNKL SDLVEHPNAA  60
SFSWNYAIFW QLSRSKSGDL VLGWGDGCCR EPREGEESER SRILNFRLED ETQQKMRKRV  120
LQKLHTLFGG TEEDNYAFGL DKVTDTEIFF LASMYFSFPR GEGGPGKCYG SGKYVWLSDA  180
FNFSFDYCVR SFLAKSAGMR TIVLIPTDIG VVELGSVRSV PECSELLQII RSSFSSTSSL  240
IRASQAASFP VGTSRKDGDN PKSDLVIGSR SDIVPKIFGQ DMNSGSVQFR EKLAGRNLED  300
RPWDVYANGN RLPFTHARNG FHGSSWTQLG NIKPGNSVEI YSPQTVAKNP HELVNRTKEE  360
FQLSRFQHQK PAQMQIDFTG ATSRPITSQP RNVDSQCLDA EVSCNEELSD DRRPRKRGRK  420
PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA YITELQKKLN  480
DMESEKEKFG NISHETKILE AKPNSEWQDQ PPSIDIQSGH DEIIVRVSCP LDAHPVTRVF  540
QAIKDSQATV FESKIDTDSD HVFHTFVVKS QGSERITKEK LIEAFSRESG SLPPSKSVIN  600
RNCA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	412	420	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-175	bHLH family protein