PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007793.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 418aa MW: 46724.6 Da PI: 8.0686

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007793.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	28	71	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l++a++ +G++ W+ a+ ++ gRt++ +k++w++ Oeu007793.1 28 KDAWTMEEELTLLNAHRIHGNK-WAELAKLLP-GRTDNAIKNHWNS 71 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MFSDSSIKHQ VFLKKFRWHN HLNPNIKKDA WTMEEELTLL NAHRIHGNKW AELAKLLPGR 60 TDNAIKNHWN SSLKKKLDFY LATGNLPSIS KNVPQNGWRD VNRTASAGEL LLCSNNGLDS 120 IALASSGATD TRIIQEGRDK LETITKIHSI VASVSDPLNE SLNSEGAKSE ILPSEADKIY 180 SSPKSKFEQC ETHGEADKCR TIATSMHGDT ALYGTLYYEP PQLNNYDLLD SNPNVSYMQS 240 ESDVSCILSP TTLVTPTALK VGSFSSRTPE YLLKIAAQSF PNTPSILRKR KSETQLSPPL 300 SRNWKPDEEA IKETSQSTDE HNQTNSLEDT KLQDKILHSD PSCAGVIDLC NAKSYNASPL 360 YQLRTRRTSV LKSVEKQLDF TLNVDQERCE EKAKSVDLSV KGIPPVTKYV YTRQRRV*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MFSDSSIKHQ VFLKKFRWHN HLNPNIKKDA WTMEEELTLL NAHRIHGNKW AELAKLLPGR  60
TDNAIKNHWN SSLKKKLDFY LATGNLPSIS KNVPQNGWRD VNRTASAGEL LLCSNNGLDS  120
IALASSGATD TRIIQEGRDK LETITKIHSI VASVSDPLNE SLNSEGAKSE ILPSEADKIY  180
SSPKSKFEQC ETHGEADKCR TIATSMHGDT ALYGTLYYEP PQLNNYDLLD SNPNVSYMQS  240
ESDVSCILSP TTLVTPTALK VGSFSSRTPE YLLKIAAQSF PNTPSILRKR KSETQLSPPL  300
SRNWKPDEEA IKETSQSTDE HNQTNSLEDT KLQDKILHSD PSCAGVIDLC NAKSYNASPL  360
YQLRTRRTSV LKSVEKQLDF TLNVDQERCE EKAKSVDLSV KGIPPVTKYV YTRQRRV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	4e-58	MYB family protein