PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007403.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 321aa    MW: 35000.3 Da    PI: 6.9777
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007403.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17236269134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  Oeu007403.1 236 CLHCEITKTPQWRAGPTGPKTLCNACGVRYKSGR 269
                  99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGPNFMDEIE CGNFFDQIDD LIEFPTENEC AGSSVVVDGD IKDFPSIWDN VLPDTDPLSS  60
GSNGSAPSDL STELAVPYED IVQLEWLSAF VEDSFSGGGS TFGKENMCVN TEPSHNQFQI  120
SSPISVLENS SSSSCTGGRI MPLSPSHRGP QRARSKRPRP ATYNPRPAIQ LISPPCSFIE  180
TPRPFVTLGV SSESENFAES RPMNKIPKLA SRVEKKKKKT SPEGNENAPT QAVRKCLHCE  240
ITKTPQWRAG PTGPKTLCNA CGVRYKSGRL FPEYRPAASP TFSPTLHSNS HKKVIEMRTK  300
IGERSVANTQ TATKPEFVTK *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-42GATA family protein