PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007310.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 352aa MW: 39862.2 Da PI: 7.2106

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007310.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.5	2.9e-07	190	212	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H Oeu007310.1 190 HYCQVCGKGFKRDANLRMHMRAH 212 68*******************99 PP
2	zf-C2H2	12	0.00065	313	328	6	21
TTEEESSHHHHHHHHH CS zf-C2H2 6 CgksFsrksnLkrHir 21 Cg++Fsrk+ L+ Hi+ Oeu007310.1 313 CGTTFSRKDKLMGHIS 328 **************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MITEAISYNP NEPQILPIYG DSQDQDNMVE TNSDTHTSSF LDNLTILKEK VHQVQSLASI 60 FLLLPHHVQP PESTLVGIPT MVTLIQEIVV TASSMMFTCQ QMAIRTPLSQ VNSDELHPGQ 120 PKSTDGPLTQ SDLEGQDFYS NETFDWYCAN YENPIPSAKN EVCKEELLST TENYDIVELD 180 AAHLLAKYTH YCQVCGKGFK RDANLRMHMR AHGDAYKSKD ALCNPIKHNG NSSRVDDILP 240 RKYSCPQEGC RWNKNHEKFQ PLKSMICVKN HYKRSHCPKM YVCKRCNTKQ FSILSDLRTH 300 EKHCGDLKWQ CSCGTTFSRK DKLMGHISLF VGHSPLDQVY ISKNGAQSAI R*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MITEAISYNP NEPQILPIYG DSQDQDNMVE TNSDTHTSSF LDNLTILKEK VHQVQSLASI  60
FLLLPHHVQP PESTLVGIPT MVTLIQEIVV TASSMMFTCQ QMAIRTPLSQ VNSDELHPGQ  120
PKSTDGPLTQ SDLEGQDFYS NETFDWYCAN YENPIPSAKN EVCKEELLST TENYDIVELD  180
AAHLLAKYTH YCQVCGKGFK RDANLRMHMR AHGDAYKSKD ALCNPIKHNG NSSRVDDILP  240
RKYSCPQEGC RWNKNHEKFQ PLKSMICVKN HYKRSHCPKM YVCKRCNTKQ FSILSDLRTH  300
EKHCGDLKWQ CSCGTTFSRK DKLMGHISLF VGHSPLDQVY ISKNGAQSAI R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-110	C2H2 family protein