PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu007213.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | NF-YA | ||||||||
Protein Properties | Length: 254aa MW: 28751.8 Da PI: 9.6668 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 80.8 | 2.3e-25 | 58 | 155 | 2 | 58 |
CBFB_NFYA 2 eplYVNaKQyqrIlkRRqkRakleeekk..........................................ldeksrkpylheSRhkhAlrRpRgsgGr 57 p++VNaKQy++I++RRq+Rak+e e+k + + + k+ylh SRh hA+rRpRg+gGr Oeu007213.3 58 GPIFVNAKQYRGIMRRRQSRAKAEMENKvlkprkilfyltillydalksinnhhvinyglsnmyldsfefI-DLGHKQYLHLSRHLHAMRRPRGNGGR 154 69*******************************************************************54.89************************ PP CBFB_NFYA 58 F 58 F Oeu007213.3 155 F 155 9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MQGAMMEYEG HFELGFGQPL ICGKYPLAEQ CYGVYSTYGP QAEGRVMLLP LNMTTDEGPI 60 FVNAKQYRGI MRRRQSRAKA EMENKVLKPR KILFYLTILL YDALKSINNH HVINYGLSNM 120 YLDSFEFIDL GHKQYLHLSR HLHAMRRPRG NGGRFLNTKK DGIQDNTDMN KTYETQLPQP 180 TGSQISEVLQ SNGGNSTSSK DSRSTNPGSE VFRKLFPMGS LHSFQFNHLH PSFQPPSNMA 240 NAGHGIVMDS KWI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06510.3 | 7e-35 | NF-YA family protein |