PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007103.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 352aa MW: 39265.8 Da PI: 6.1882

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007103.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.4	1.5e-08	15	56	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r+C+++++ + + +C+ + +lC dC +H H++ Oeu007103.1 15 RMCDTCQSAPWTVYCRADAAYLCIDCDARIHAAngdssrHER 56 79*****************************55667777775 PP
2	zf-B_box	28.5	3.1e-09	57	102	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC +C + H H+++p+ Oeu007103.1 57 VWVCEACESAPAAFLCKADAASLCTTCDSDVHLAnplarrHKRIPI 102 689*****************************55577777999886 PP
3	CCT	64.2	3.8e-22	285	328	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+k+RkF+K irY++RKa+Ae+RpR+KGrF+k++ Oeu007103.1 285 REARVLRYREKKKKRKFQKMIRYATRKAYAETRPRIKGRFAKRT 328 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MLKEENGDTS NNLARMCDTC QSAPWTVYCR ADAAYLCIDC DARIHAANGD SSRHERVWVC 60 EACESAPAAF LCKADAASLC TTCDSDVHLA NPLARRHKRI PILPIPGSLH GPSAAPTGDM 120 DADGEFLTPE DDEAASWLLL NRVKKGGNEE NNNGHLSGEV DEYIDLNQYN SCQEIHFTED 180 QYKNQKQNHN VPDHDKKLYD GDSVVPVQYE SKGKEEVHQN RFQLEMEYEM SNAGVSLSSL 240 DVGVVPESRL SEVSSVSQQR PSKGTIYLSS SPPIQMPTQL SAMDREARVL RYREKKKKRK 300 FQKMIRYATR KAYAETRPRI KGRFAKRTDS DQMFSTSSIA DSPGYGIVPS F*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MLKEENGDTS NNLARMCDTC QSAPWTVYCR ADAAYLCIDC DARIHAANGD SSRHERVWVC  60
EACESAPAAF LCKADAASLC TTCDSDVHLA NPLARRHKRI PILPIPGSLH GPSAAPTGDM  120
DADGEFLTPE DDEAASWLLL NRVKKGGNEE NNNGHLSGEV DEYIDLNQYN SCQEIHFTED  180
QYKNQKQNHN VPDHDKKLYD GDSVVPVQYE SKGKEEVHQN RFQLEMEYEM SNAGVSLSSL  240
DVGVVPESRL SEVSSVSQQR PSKGTIYLSS SPPIQMPTQL SAMDREARVL RYREKKKKRK  300
FQKMIRYATR KAYAETRPRI KGRFAKRTDS DQMFSTSSIA DSPGYGIVPS F*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	295	300	KKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	3e-87	CO-like family protein