PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006960.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Protein Properties

Length: 310aa MW: 35075 Da PI: 9.6754

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006960.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.4	8.3e-16	110	199	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f k ++ps+v +l lpk+f+++h + + t++l de+ +++e + +++ l++GW++F +++L gD+++F+l++ + l+v+++r Oeu006960.1 110 FGKCMLPSNVAHGFWLHLPKSFCSQHLPN--HDATVVLVDEWANEYETSYLLYRHG----LSAGWRGFSVSHRLLKGDILIFELIEPCK--LKVQIVR 199 66999*****************99533..5679***********666666....*********************997444..5888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MEAKKFKQKL YEFETQNCKK EDEANIIAES SQKKRKRMQS VTKKNMVSER PLSLKSKDKQ 60 VSSRNSKKLG RSKGKRTRFS DIYDNIEAKY SVMERAERVV ARLANEVPSF GKCMLPSNVA 120 HGFWLHLPKS FCSQHLPNHD ATVVLVDEWA NEYETSYLLY RHGLSAGWRG FSVSHRLLKG 180 DILIFELIEP CKLKVQIVRV NETDVVEAAL CLLNLNACQN GVNLDLVKKD NKKRKKVKYV 240 EPFLSDISTP LESSQSKGKN TLNSSLDQSG SNSDDFGSKV LQGSEVTNRL CYSETPFLHD 300 HPHNGVTCS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	59	KKRKRMQSVTKKNMVSERPLSLKSKDK
2	232	236	KKRKK
3	232	258	KKRKRMQSVTKKNMVSERPLSLKSKDK
4	233	259	KKRKRMQSVTKKNMVSERPLSLKSKDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	1e-33	B3 family protein