PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006653.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 279aa    MW: 31554.5 Da    PI: 9.4927
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006653.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.52.6e-12121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G g+W+ I+r +   +t+ q+ s+ qky
      Oeu006653.1 121 PWTEEEHRLFLLGLQEHGRGDWRNISRNFVISKTPTQVASHAQKY 165
                      8*****************************789***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
METLFPASFI SNSSLLMQQR KNPIWTKEEN KQFESALAVF DESTPNRWVM VAAMIPGKSV  60
CDVINQYKEL VADVSNIEAG LVPIPGYLNS SFTMKIPDNH SFDVYRKRSR SCNQERKKGV  120
PWTEEEHRLF LLGLQEHGRG DWRNISRNFV ISKTPTQVAS HAQKYYLRQL SGGKDKRRPS  180
IHDITSVHFT NNCSSDNIKS PSSDNSSSVT VQKSIGTPKI LLNWNHKNNG ASMFFDSAYD  240
NPLTKFSYDI ASHSTCIVNT GAANQSFQFP FQSKRYLE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106118RKRSRSCNQERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-81MYB family protein