PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006565.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 294aa    MW: 32767.3 Da    PI: 6.7977
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006565.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA51.92.6e-16130198158
    CBFB_NFYA   1 deplYVNaKQyqrIlkR....RqkRakleeekk........ldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep++VNaKQy+  ++       k ak+  ++           +    pylheSRh+hA++R+RgsgGrF
  Oeu006565.1 130 EEPVFVNAKQYHDLMRNdclpMSKWAKMTMHEYhfekaessF-AFLWLPYLHESRHQHAMKRARGSGGRF 198
                  69*************973322356666666433555555542.44567*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MPTLAKNDDR HLETAVCNIS SSTTYIQPWW RVFGNSSMPP SGEQANGDVA SKGNETNVAS  60
QSGLNGTNGQ KEQHPDINSQ MELVGHSIML TSNPYTDPQY GGVMSYGAMG HPHLLGYHPG  120
RMPLPLEMEE EPVFVNAKQY HDLMRNDCLP MSKWAKMTMH EYHFEKAESS FAFLWLPYLH  180
ESRHQHAMKR ARGSGGRFLN TKRLNEQEKN STAEEQPKFG TIASTPSGNS TGSTMVPDMH  240
KEPSLSNGNS NGYRLSSFHY KQLSQSEQGR GHFGQDNWCS LEEQSSQRAD PSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.17e-21NF-YA family protein