PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006514.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 327aa    MW: 36245.3 Da    PI: 7.9565
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006514.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.32.9e-4025101278
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                  C v+gC+adls ++eyhrrhkvCe+hsk++ v++ g+eqrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+q+
  Oeu006514.1  25 CLVDGCDADLSLCREYHRRHKVCEAHSKTARVTIGGREQRFCQQCSRFHSLIEFDEGKRSCRKRLDGHNRRRRKPQP 101
                  **************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MDSSSFSGSS KRAKAPGNVT QVAQCLVDGC DADLSLCREY HRRHKVCEAH SKTARVTIGG  60
REQRFCQQCS RFHSLIEFDE GKRSCRKRLD GHNRRRRKPQ PDTLSRSSGL MFPVQQGTRV  120
LSFNSPEIIP NPSASSSWAG IVKTENNMIL YNNQPHLDYI ERQNTFPEIS AHSFKGVNQL  180
QFLQSPHQSV QEISICQPLL DPNAASGSNN TCCQNLYADG LNQVVDSDRA LSLLSSAPAV  240
SREFGLDHVV QHDPLLSNAQ SVHSSQYIGL GQYSYPREVE SKPVGFDMDS PHGSKNSTVH  300
FRGMFMNEPD GSSTSGSHQT RTFAWE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18299KRSCRKRLDGHNRRRRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.15e-46SBP family protein