PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006315.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family BBR-BPC
Protein Properties Length: 286aa    MW: 31295.7 Da    PI: 9.8523
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006315.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind321.13.3e-9812851301
    GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki...rernlalsekkaavaerd..........maflqrdkalaernkalverdnkllall 85 
                  mddd+   rn+gyye+   lk +lglqlms ++erd+k     ++n  + + ++a+ +rd          m++  rd+++++        ++k+l++ 
  Oeu006315.1   1 MDDDALSMRNWGYYEQP-PLKGHLGLQLMSPVTERDTKSflsGSNNPIMVAANGAFRPRDcvvteppvthMDY-VRDSWINH--------RDKFLHMF 88 
                  9***9999*******99.9*******************999867777799***********************.9******9........78999999 PP

    GAGA_bind  86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183
                  + +      +pv  + +   +s   +q l +p+++d+a       ++e++ +++a       + kk+++ a+  k +kakk  k ++++k++ +++  
  Oeu006315.1  89 PGNS----YNPVFAEPSGSHSS---MQILGQPDTTDDAGV-----TIEEPSVKKAGG-----PAKKRSAAAAALKPTKAKKSSKVPSVPKENGNSSV- 168
                  9433....34444433333333...444444555554433.....233333333322.....23333334455566677777888888888888877. PP

    GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                   +r+k++kk++d+v+ng+++D+s++P+PvCsCtG ++qCY+WG+GGWqSaCCtttiS+yPLP+s krrgaRiagrKmSqgafkk+LekLa+e y++ n
  Oeu006315.1 169 -HRAKTTKKNLDVVINGIDMDISGIPIPVCSCTGNPQQCYRWGCGGWQSACCTTTISMYPLPMSNKRRGARIAGRKMSQGAFKKVLEKLASEDYNFTN 265
                  .79*********************************************************************************************** PP

    GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                  p+DLk++WAkHGtnkfvtir
  Oeu006315.1 266 PIDLKTYWAKHGTNKFVTIR 285
                  *******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDDDALSMRN WGYYEQPPLK GHLGLQLMSP VTERDTKSFL SGSNNPIMVA ANGAFRPRDC  60
VVTEPPVTHM DYVRDSWINH RDKFLHMFPG NSYNPVFAEP SGSHSSMQIL GQPDTTDDAG  120
VTIEEPSVKK AGGPAKKRSA AAAALKPTKA KKSSKVPSVP KENGNSSVHR AKTTKKNLDV  180
VINGIDMDIS GIPIPVCSCT GNPQQCYRWG CGGWQSACCT TTISMYPLPM SNKRRGARIA  240
GRKMSQGAFK KVLEKLASED YNFTNPIDLK TYWAKHGTNK FVTIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.15e-90BBR-BPC family protein