PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu006202.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 326aa MW: 35748.1 Da PI: 5.9703

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu006202.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1e-18	161	215	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq Lee F+++++++ ++++ LAk+l+L rqV vWFqNrRa+ k Oeu006202.1 161 RKKLRLTKEQSAFLEESFKEQSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 215 788899***********************************************98 PP
2	HD-ZIP_I/II	126	1.7e-40	161	250	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+keq+++LEesF+e+++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l+een+rL+ke +eLr +l Oeu006202.1 161 RKKLRLTKEQSAFLEESFKEQSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKSCCETLTEENRRLQKELQELR-AL 250 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MDLALSLGET PKPFTFLDKS QKIAGNDLGF CMAFGEKSAE ADTGGKVSLD SDLPIQLDLL 60 PFSPVPRNQT SFDKLHFSWL NENLVGEPGN VNRRIGGVEE AEEAMAISSP NSTVSSFQMD 120 FSIYRNGRGK RDFETVTLEG DADRGGASSR ASDDEENSMA RKKLRLTKEQ SAFLEESFKE 180 QSTLNPKQKQ ALAKQLNLRP RQVEVWFQNR RARTKLKQTE VDCEYLKSCC ETLTEENRRL 240 QKELQELRAL KASQPFYMQP PATTLSMCPS CERVSTTTTS TAAPSPTTAI ASAGGMTPSN 300 TGLSLANPKL FSFSPGQIHA QQAAS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	218	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	5e-87	HD-ZIP family protein