PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006163.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family B3
Protein Properties Length: 279aa    MW: 31043.9 Da    PI: 9.8431
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006163.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3382.9e-125703096
                 ..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3 30 keesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                 +++++++ l++++g+sW+v+ i  +k   ++++ +GW +Fv++n ++ gD+++F+l++  + el v++
  Oeu006163.1  5 PKCKVKILLRNLKGESWTVNSIPtTKVHTSHTFCGGWLGFVRDNTIDLGDICIFELVR--KYELQVRI 70
                 458899***************77677777799***********************987..44456666 PP
2B3505.4e-16172264196
                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                  f+k +++ +v+ s  l +p +f  +h   +++ ++++l +++g+ W+v+ i + k ++ +++ +GW  Fv++n+++ gD+++F+l+g+ e   +v++
  Oeu006163.1 172 FVKSMKKFNVSGSYTLKVPYQFSMDHL--PNCRTEIVLHNLKGECWTVNSIPTMKVQTlHTFCGGWMAFVRDNDIQMGDICIFELIGKCEM--RVHI 264
                  88999999999999********98886..45899****************8888887789999***********************96555..4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEHLPKCKVK ILLRNLKGES WTVNSIPTTK VHTSHTFCGG WLGFVRDNTI DLGDICIFEL  60
VRKYELQVRI LHVGKERIDG NVGEAFHNRN INGSAGTSNK ISRRKSKKIS GLANSKRGSS  120
LSSHTCIGES DIQKKFGSLS KQGPYAKGCM SMKSAPEEKI AVESFVSNLP HFVKSMKKFN  180
VSGSYTLKVP YQFSMDHLPN CRTEIVLHNL KGECWTVNSI PTMKVQTLHT FCGGWMAFVR  240
DNDIQMGDIC IFELIGKCEM RVHISGIGKK AVDYQNGT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-12B3 family protein